Publications

2025

1. Soil microbiome bacteria protect plants against filamentous fungal infections via intercellular contacts

Lin L, Shen D, Shao X, Yang Y, Li L, Zhong C, Jiang J, Wang M, Qian G*

PNAS (2025). DOI: 10.1073/pnas.2418766122

2024

1. Physiologically based toxicokinetic and toxicodynamic (PBTK-TD) modelling of cis-bifenthrin in Carassius auratus and Xenopus laevis accounting for reproductive toxicity

Du G, Qian Z, Huang L, Wang M, Wang Q*

Environmental Research (2024). DOI: 10.1016/j.envres.2024.120126

2. Aspergillus cvjetkovicii protects against phytopathogens through interspecies chemical signalling in the phyllosphere

Fan X, Matsumoto H, Xu H, Fang H, Pan Q, Lv T, Zhan C, Feng X, Liu X, Su D, Fan M, Ma Z, Berg G, Li S*, Cernava T*, Wang M*

Nature Microbiology (2024). DOI: 10.1038/s41564-024-01781-z

3. Type IV secretion system effector sabotages multiple defense systems in a competing bacterium

Wang B, Xu F, Zhang Z, Shen D, Wang L, Wu H, Yan Q, Cui C, Wang P, Wei Q, Shao X, Wang M, Guoliang Qian*

The ISME Journal (2024). DOI: 10.1093/ismejo/wrae121

4. Early surveillance of rice Bakanae disease using deep learning and hyperspectral imaging

Chen S, Lu X, Fang H, Perumal A, Li R, Feng L, Wang M, Liu Y*

aBIOTECH (2024). DOI: 10.1007/s42994-024-00169-1

5. Disease resistance through M genes

Zhan C, Wang M*

Nature Plants (2024). DOI: 10.1038/s41477-024-01644-9

6. Gut pathobiome mediates behavioral and developmental disorders in biotoxin‐exposed amphibians

Pan Q, Lv T, Xu H, Fang H, Li M, Zhu J, Wang Y, Fan X, Xu P, Wang X, Wang Q, Matsumoto H*, Wang M*

Environmental Science & Ecotechnology (2024). DOI: 10.1016/j.ese.2024.100415

7. Seed microbiome-mediated herbicide resistance evolution in weeds

Hu T#, Fang H#, Pan Q#, Xu H, Lv T, Fan X, Wang Y, Guo Y, Mou L, Xu J, Zhu J*, Matsumoto H*, Wang M*

New Phytologist (2024). DOI: 10.1111/nph.19459

8. Exploring biodiversity and ethnobotanical significance of Solanum species in Uzbekistan: unveiling the cultural wealth and ethnopharmacological uses

Gafforov Y…, Wang M, et al.

Frontiers in Pharmacology (2024), 14(14):1287793

2023

1. Advanced-technology-assisted prediction of plant disease: current view and future perspectives

Li R, Chen S, Matsumoto H, Gouda M, Gafforov Y, Wang M*, Liu Y*

aBIOTECH (2023) (Cover Story)

2. Mitochondrial dynamics disruption: Unraveling Dinotefuran's impact on cardiotoxicity

Zhu J, Tao Q, Du G, Huang L, Li M, Wang M, Wang Q*

Environmental Pollution (2023). DOI: https://doi.org/10.1016/j.envpol.2023.123238

3. Macrofungi as Medicinal Resources in Uzbekistan: Biodiversity, Ethnomycology, and Ethnomedicinal Practices

Gafforov Y…, Wang M, Abdullaev B, Bussmann R, Zengin G, Chen J*

Journal of Fungi (2023), 9:922. DOI: https://doi.org/10.3390/jof9090922

4. Identification and functional analyses of the transcription factors AcWRKY117 and AcWRKY29 involved in waterlogging response in kiwifruit plant

Xing M, Wang W, Zhang C, Xi D, Wang M, Yin X, Liu H, Liu X*

Scientia Horticulturae (2023). DOI: https://doi.org/10.1016/j.scienta.2023.112568

5. Editorial: Rhizosphere microbiome engineering for crop cultivation

Cheng X, Wang M, Yuan M, Li J, Xiong W

Frontiers in Bioengineering and Biotechnology (2023). DOI: https://doi.org/10.3389/fbioe.2023.1267442

6. Plant pathogenesis: towards multidimensional understanding of microbiome

Lv T, Zhan C, Pan Q, Xu H, Fang H, Wang M*, Matsumoto H*

iMeta (2023) (Cover Story). DOI: https://doi.org/10.1002/imt2.129

7. Core community drives phyllosphere bacterial diversity and function in multiple ecosystems

Xue R, Liu S, Stirling E, Wang Y, Zhao K, Matsumoto H, Wang M, Xu J, Bin Ma*

Science of The Total Environment (2023). DOI: https://doi.org/10.1016/j.scitotenv.2023.165187

8. Machine-learning-facilitated prediction of heavy metal contamination in distiller's dried grains with solubles

Feng L, Chen S, Chu H, Zhang C, Hong Z, He Y, Wang M, Liu Y*

Environmental Pollution (2023), 333. DOI: https://doi.org/10.1016/j.envpol.2023.122043

9. Soterobionts: Disease-preventing microorganisms and proposed strategies to facilitate their discovery

Wang M, Cernava T*

Current Opinion in Microbiology (2023). DOI: https://doi.org/10.1016/j.mib.2023.102349

10. Editorial: The Phyllosphere Microbiome

Wang M*, Cernava T

Frontiers in Plant Science (2023)

11. A 7-year path towards exploring a disease-suppressive arsenal

Wang M*, Matsumoto H, Liu X

Nature Portfolio Microbiology Community (2023)

12. Phyllosphere microbiome induces host metabolic defence against rice false-smut disease

Liu X#, Matsumoto H#, Lv T, Zhan C, Fang H, Pan Q, Xu H, Fan X, Chu T, Chen S, Qiao K, Ma Y, Sun L, Wang Q, Wang M#*

Nature Microbiology (2023). DOI: 10.1038/s41564-023-01379-x (ESI Highly Cited Paper, Cover Story)

13. Characterization of the chemical fungicides-responsive and bacterial pathogen-preventing Bacillus licheniformis in rice spikelet

Zhan C, Wu M, Fang H, Liu X, Pan J, Fan X, Wang M*, Matsumoto H*

Food Quality and Safety (2023). DOI: https://doi.org/10.1093/fqsafe/fyad005

2022

1. Pathways to engineering the phyllosphere microbiome for sustainable crop production

Zhan C, Matsumoto H, Liu Y, Wang M*

Nature Food (2022). DOI: 10.1038/s43016-022-00636-2 (ESI Highly Cited Paper)

2. Microbiome Research as an Effective Driver of Success Stories in Agrifood Systems – A Selection of Case Studies

Olmo R*…, Wang M, Zwirzitz B, Selberherr E, Wagner M

Frontiers in Microbiology (2022), 13:834622. DOI: 10.3389/fmicb.2022.834622

3. Bacterial-fungal interactions under agricultural settings: from physical to chemical interactions

Zhou Y, Wang H, Xu S, Liu K, Qi H, Wang M, Chen X, Berg G, Ma Z, Cernava T*, Chen Y*

Stress Biology (2022). DOI: https://doi.org/10.1007/s44154-022-00046-1

4. L-theanine exuded from Camellia sinensis roots regulates element cycling in soil by shaping the rhizosphere microbiome assembly

Xie H, Chen Z, Feng X, Wang M, Luo Y, Wang Y, Xu P*

Science of The Total Environment (2022), 837, 155801. DOI: https://doi.org/10.1016/j.scitotenv.2022.155801

5. Gut microbiota dysbiosis involves in host non-alcoholic fatty liver disease upon pyrethroid pesticide exposure

Li M, Liu T, Yang T, Zhu J, Zhou Y, Wang M, Wang Q*

Environmental Science and Ecotechnology (2022). DOI: https://doi.org/10.1016/j.ese.2022.100185

6. Continental scale deciphering of microbiome networks untangles the phyllosphere homeostasis in tea plant

Xu P, Stirling E, Xie H, Li W, Lv X, Matsumoto H, Cheng H, Xu A, Lai W, Wang Y, Zheng Z, Wang M*, Liu X, Ma B*, Xu J

Journal of Advanced Research (2022). DOI: https://doi.org/10.1016/j.jare.2022.04.002 (ESI Highly Cited Paper)

7. The seed’s hidden defense arsenal: using bacteria to defend against disease

Matsumoto H, Cernava T, Wang M*

The Science Breaker (2022). DOI: 10.25250/thescbr.brk614
(Bacterial seed endophyte shapes disease resistance in rice, Nature Plants 7, 60-72)

8. Reprogramming of phytopathogen transcriptome by a non-bactericidal pesticide residue alleviates its virulence in rice

Matsumoto H, Qian Y, Fan X, Chen S, Nie Y, Qiao K, Xiang D, Zhang X, Li M, Guo B, Shen P, Wang Q, Yu L, Cernava T*, Wang M*

Fundamental Research (2022), 2, 198-207. DOI: 10.1016/j.fmre.2021.12.012 (Cover Story)

2021

1. Temporal metabolite responsiveness of microbiota in the tea plant phyllosphere promotes continuous suppression of fungal pathogens

Xu P, Fan X, Mao Y, Cheng H, Xu A, Lai W, Lv T, Hu Y, Nie Y, Zheng X, Meng Q, Wang Y, Cernava T*, Wang M*

Journal of Advanced Research (2021). DOI: 10.1016/j.jare.2021.10.003

2. Hyperspectral imaging with shallow convolutional neural networks (SCNN) predicts the early herbicide stress in wheat cultivars

Chu H, Zhang C, Wang M, Gouda M, Wei X, He Y, Liu Y*

Journal of Hazardous Materials (2021). DOI: 10.1016/j.jhazmat.2021.126706

3. Keystone taxa-mediated bacteriome response shapes the resilience of the paddy ecosystem to fungicide triadimefon contamination

Fan X, Fu Y, Nie Y, Matsumoto H, Wang Y, Hu T, Pan Q, Lv T, Fang H, Xu H, Wang Y, Ge H, Zhu G, Liu Y, Wang Q, Wang M*

Journal of Hazardous Materials (2021). DOI: 10.1016/j.jhazmat.2021.126061

4. Pyrethrins elicit olfactory response and spatial repellency in Aedes albopictus

Yan R, Zhou Q, Xu Z, Wu Y, Zhu G, Wang M, Guo Y, Dong K*, Chen M*

Pest Management Science (2021). DOI: 10.1002/ps.6390

5. Prevalence of azole-resistant Aspergillus fumigatus is highly associated with azole fungicide residues in the fields

Cao D, Wang F, Yu S, Dong S, Wu R, Cui N, Ren J, Xu T, Wang S, Wang M, Fang H, Yu Y*

Environmental Science & Technology (2021). DOI: 10.1021/acs.est.0c03958

6. Bacterial seed endophyte shapes disease resistance in rice

Matsumoto H, Fan X, Wang Y, Kusstatscher P, Duan J, Wu S, Chen S, Qiao K, Wang Y, Ma B, Zhu G, Hashidoko Y, Berg G, Cernava T*, Wang M*

Nature Plants (2021). DOI: 10.1038/s41477-020-00826-5
(Cover Story, F1000 Prime Recommendation, ESI Hot Papers)

2020

1. Overhauling the assessment of agrochemical-driven interferences with microbial communities for improved global ecosystem integrity

Wang M, Cernava T*

Environmental Science & Ecotechnology (2020). DOI: 10.1016/j.ese.2020.100061
(Editor's Choice, Cover Story)

2. Implications of Endophytic Microbiota in Camellia sinensis: A Review on Current Understanding and Future Insights

Xie H, Feng X, Wang M, Wang Y, Awasthi M, Xu P*

Bioengineered (2020). DOI: 10.1080/21655979.2020.1816788

3. Vision-based moving obstacles detecting and tracking in paddy field using Improved Yolov3 and Deep SORT

Qiu H, Zhao N, Zhou L, Wang M, Liang L, Fang H, He Y, Liu Y*

Sensors (2020). DOI: 10.3390/s20154082

4. Tracking resistomes, virulence genes, and bacterial pathogens in long-term manure-amended greenhouse soils

Zhang H, Zhang Q, Song J, Zhang Z, Chen S, Long Z, Wang M, Yu Y, Fang H*

Journal of Hazardous Materials (2020). DOI: 10.1016/j.jhazmat.2020.122618

5. Exposure to prothioconazole induces developmental toxicity and cardiovascular effects on zebrafish embryo

Sun Y, Cao Y, Tong L, Tao F, Wang X, Wu H*, Wang M*

Chemosphere (2020). DOI: 10.1016/j.chemosphere.2020.126418

6. Coexposure to environmental concentrations of cis‐bifenthrin and graphene oxide: adverse effects on the nervous system during metamorphic development of Xenopus laevis

Li M, Zhu J, Fang H, Wang M, Wang Q*, Zhou B

Journal of Hazardous Materials (2020). DOI: 10.1016/j.jhazmat.2020.120995

2019

1. Microenvironmental interplay predominated by beneficial Aspergillus abates fungal pathogen incidence in paddy environment

Fan X, Matsumoto H, Wang Y, Hu Y, Liu Y, Fang H, Nitkiewicz B, Lau Y, Wang Q, Fang H, Wang M*

Environmental Science & Technology (2019). Pages: 13042-13052

2. The simulated N deposition accelerates net N mineralization and nitrification in a tropical forest soil

Nie Y, Han X, Chen J, Wang M, Shen W*

Biogeosciences (2019). DOI: https://doi.org/10.5194/bg-16-1-2019

3. Endophytic fungus Falciphora oryzae promotes lateral root growth by producing indole derivatives after sensing plant signals

Sun X, Wang N, Li P, Jiang Z, Liu X, Wang M, Su Z, Zhang C, Lin F, Liang Y*

Plant, Cell & Environment (2019). DOI: 10.1111/pce.13667

4. Exposure to graphene oxide at environmental concentrations induces thyroid endocrine disruption and lipid metabolic disturbance in Xenopus laevis

Li M, Jiaping Zhu J, Wang M, Fang H, Zhu G, Wang Q*

Chemosphere (2019). DOI: 10.1016/j.chemosphere.2019.124834

5. Chronic exposure to environmental Levels of cis‐bifenthrin: enantioselectivity and reproductive effects on zebrafish (Danio rerio)

Xiang D, Zhong L, Shen S, Song Z, Zhu G, Wang M, Wang Q*, Zhou B

Environmental Pollution (2019). Pages: 175-184

6. Enantioselectivity of toxicological responses induced by maternal exposure of cis‐bifenthrin enantiomers in zebrafish (Danio rerio) Larvae

Xiang D, Qiao K, Song Z, Shen S, Wang M, Wang Q*

Journal of Hazardous Materials (2019). Pages: 655-665

7. First report of Neofusicoccum parvum causing stem canker and necrosis of Phoebe sheareri in Zhejiang province, China

Hu Y*, Chen Y#, Wei H#, Cheng Y*, Jiang B, Tong X, Olson A, Shen J, Song Q, Zhu L, Wang E, Zhong L, Wang M#

Plant Disease (2019)

2018

1. 稻曲病菌离体培养体系的构建与优化

刘晓玉, 潘九月, MATSUMOTO Haruna, 范小艳, 林婷, 钱圆, 朱国念, 王蒙岑*

农药学学报, 2018, 20(1): 41-48

2. 螺虫乙酯对大型溞的急性和慢性毒性效应

陈颖, 陶芳怡, 刘训悦, 王蒙岑, 饶琼, 顾丹璐, 吴慧明*

农药学学报, 2018, 20(1): 118-123

3. Biotoxin tropolone contamination associated with nationwide occurrence of pathogen Burkholderia plantarii in agricultural environments in China

Liu X#, Fan X#, Matsumoto H, Nie Y, Sha Z, Yi K, Pan J, Qian Y, Cao M, Wang Y, Zhu G, Wang M*

Environmental Science & Technology (2018). Pages: 5105-5114. DOI: 10.1021/acs.est.7b05915

4. Ammonium nitrogen content is a dominant predictor of bacterial community composition in an acidic forest soil with exogenous nitrogen enrichment

Nie Y#, Wang M#, Zhang W, Ni Z, Hashidoko Y, Shen W*

Science of The Total Environment (2018). Pages: 407-415

2017

1. First report of Lasiodiplodia theobromae causing stem canker on common Fig (Ficus carica) in Zhejiang Province of China

Chen Y#, Wei H*, Du G, Zhu L, Song Q, Hu Y*, Wang E, Wang M#, Fan X

Plant Disease, 102(12): PDIS-05-18-0887

2. Biochemical and histological alterations in adult zebra fish (Danio rerio) ovary following exposure to the tetronic acid insecticide spirotetramat

Wu H, Rao Q, Zheng J, Mao C, Sun Y, Gu D, Wang M, Liu X*

Ecotoxicology and Environmental Safety, 2018, 164: 149-154

3. 五氟磺草胺在稻田环境中的消解动态及残留特性

李文卓, 钱圆, MATSUMOTO Haruna, 杨斌, 王蒙岑*, 朱国念

农药学学报, 2017, 19(1): 61-67

4. 纳米标记免疫层析法在农药残留检测中的应用研究进展

司芳芳, 郭逸蓉, 赵颖, 桂文君, 王蒙岑, 朱国念

农药学学报, 2017, 19(4): 409-417

5. 农药和重金属复合污染物对大型溞的毒性效应

吴慧明, 陈颖, 胡婷婷, 顾丹璐, 王蒙岑, 饶琼, 刘训悦

农药学学报, 2017, 19(6): 716-722

6. Quantum dot-based lateral flow immunoassay for detection of neonicotinoid residues in tea leaves

Wang S, Liu Y, Jiao S, Zhao Y, Guo Y, Wang M*, Zhu G

Journal of Agricultural and Food Chemistry, 2017, 65(46): 10107-10114

7. Multiple spectroscopic analyses reveal the fate and metabolism of sulfamide herbicide triafamone in agricultural environments

Wang M, Qian Y, Liu X, Wei P, Deng M, Wang L, Wu H, Zhu G*

Environmental Pollution, 2017, 230: 107-115

8. Dissipation, occurrence and risk assessment of a phenylurea herbicide tebuthiuron in sugarcane and aquatic ecosystems in South China

Qian Y#, Matsumoto H#, Liu X#, Li S, Liang X, Liu Y, Zhu G, Wang M*

Environmental Pollution, 2017, 227: 389-396

2016

1. 水稻病原菌Burkholderia plantarii群体感应和群体淬灭研究进展

Matsumoto H, 王蒙岑*, 桂文君, 郭逸蓉, 朱国念

农药学学报, 2016, 18(3): 273-281

2. 腈菌唑在豇豆及露地土壤中的沉积及消解特性

刘雅楠, 李文卓, 魏鹏, 曹梦超, 赵颖, 王蒙岑*, 朱国念

生态与农村环境学报, 2016, 32(5): 832-836

3. 气相色谱-质谱检测蔬菜中氟吡菌酰胺及其代谢物残留

李文卓, 钱圆, MATSUMOTO Haruna, 刘晓玉, 秦丽, 王蒙岑*, 朱国念

农药学学报, 2016, 18(6): 759-764

4. Genome sequence of Burkholderia plantarii ZJ171, a tropolone producing bacterial pathogen responsible for rice seedling blight

Qian Y#, Matsumoto H#, Liu X#, Li S, Liang X, Liu Y, Zhu G, Wang M*

Genome Announcements (2016), 4: e01318-01316

5. Metabolic and dynamic profiling for risk assessment of fluopyram, a typical phenylamide fungicide widely applied in vegetable ecosystem

Wei P, Liu Y, Li W, Qian Y, Nie Y, Kim D, Wang M*

Scientific Reports (2016), 6: 33898

6. First report of rice seedling blight caused by Burkholderia plantarii in North and Southeast China

Wang M*, Wei P, Cao M, Zhu L, Lu Y

Plant Disease (2016), 100:3, 645

7. Indole-3-acetic acid produced by Burkholderia heleia acts as a phenylacetic acid antagonist to disrupt tropolone biosynthesis in Burkholderia plantarii

Wang M, Tachibana S, Murai Y, Li L, Sharon Y, Cao M, Zhu G, Hashimoto M, Hashidoko Y*

Scientific Reports (2016), 6: 22596

8. Physiological and genotypic characteristic of nitrous oxide (N₂O)-emitting Pseudomonas species isolated from dent corn andisol farmland in Hokkaido, Japan

Nie Y, Li L, Isoda R, Wang M, Hatano R, Hashidoko Y*

Microbes and Environments (2016), 31(2): 93–103

9. Residual behavior and risk assessment of the mixed formulation of benzene kresoxim-methyl and fluazinam in cucumber field application

Wang Q, Wei P, Cao M, Liu Y, Wang M, Guo Y*, Zhu G

Environmental Monitoring and Assessment (2016), 188:341

2015

1. QuEChERS结合UPLC-ESI-MS/MS分析吡蚜酮和异丙威SC在稻田中的残留特征

王全胜, 曹梦超, 刘雅楠, 魏鹏, 朱国念, 王蒙岑*

农业环境科学学报, 2015, 34(3): 431-437

2. QuEChERS-PSA-气相色谱法分析联苯菊酯·啶虫脒微乳剂在茶园中的残留特征

魏鹏, 曹梦超, 王全胜, 刘雅楠, 王蒙岑*, 朱国念

农业环境科学学报, 2015, 34(10): 2032-2038

3. Track of fate and primary metabolism of trifloxystrobin in rice paddy ecosystem

Cao M, Li S, Wang Q, Wei P, Liu Y, Zhu G, Wang M*

Science of The Total Environment (2015), 518-519: 417-423

4. Distribution of thifluzamide, fenoxanil and tebuconazole in rice paddy and dietary risk assessment

Fu Y, Zheng Z, Wei P, Wang M*, Zhu G*, Liu Y*

Toxicological & Environmental Chemistry (2015), 98(1): 118-127

5. Nitrous oxide emission potentials of Burkholderia species isolated from the leaves of a boreal peat moss Sphagnum fuscum

Nie Y, Li L, Wang M, Tahvanainen T, Hashidoko Y*

Bioscience, Biotechnology, and Biochemistry (2015), 79(12): 2086-2095

6. 氯氟氰虫酰胺在稻田环境中的残留及消解特性

曹梦超, 王全胜, 王义虎, 赵颖, 刑家华, 王蒙岑, 朱国念

农药学学报, 2015, 17(4): 447-454

2014

1. Effects of methyl viologen dichloride and other chemicals on nitrous oxide (N₂O) emission and repression by pseudomonad denitrifiers isolated from corn farmland soil in Hokkaido, Japan

Li L, Wang M, Hatano R, Hashidoko Y*

Journal of Pesticide Science, 39(3): 115-120

2. 噻菌茂在稻田土壤中的微生物降解及对土壤细菌种群数量的影响

左晓霞, 张赫琼, 曹楚彦, 耿翠敏, 王蒙岑, 朱国念

农药学学报, 2014, 16(4): 467-471

3. 稻田土壤8种真菌对4种杀菌剂的敏感性分析

张赫琼, 付岩, 左晓霞, 曹楚彦, 王蒙岑, 张传清, 朱国念

农药学学报, 2014, 16(5): 529-534

2013

1. 施药因子对三唑磷在水稻上残留沉积的影响

付岩, 王蒙岑*, 秦丽, 桂文君, 朱国念

农药学学报, 2013, 15(1): 79-84

2. Carot-4-en-9,10-diol, a conidiation-inducing sesquiterpene diol produced by Trichoderma virens PS1-7 upon exposure to chemical stress from highly active iron chelators

Wang M, Hashimoto M, Hashidoko Y*

Applied and Environmental Microbiology, 2013, 79(6): 1906-1914

3. Repression of tropolone production and induction of pseudo-biofilm in Burkholderia plantarii by carto-4-en-9,10-diol, a cell-to-cell signaling disrupter from Trichoderma virens

Wang M, Takayama T, Kim D, Sakihama Y, Tahara S, Hashidoko Y*

PLoS ONE, 2013, 8(11): e78024

4. Effects of different classes of attractants, cochliophilin A and N-(E)-feruloyl-4-O-methyldopamine, on the response of Aphanomyces cochlioides zoospores in their chemoattraction and activation of motility linked with intracellular cAMP